STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH88993.1Conserved membrane protein of unknown function: putativeVon Willebrand factor type A domain (vwa); Homologs of previously reported genes of unknown function. (318 aa)    
Predicted Functional Partners:
CCH88994.1
Homologs of previously reported genes of unknown function.
 
  
 0.989
CCH88995.1
Putative ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.952
CCH86437.1
Mg-chelatase; Function of strongly homologous gene; enzyme.
 
 0.666
chlD
Cobaltochelatase subunit; Function of strongly homologous gene; transporter.
  
 0.608
CCH88877.1
ATPase associated with various cellular activities AAA_3; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.576
CCH88996.1
Protein of unknown function; No homology to any previously reported sequences.
       0.565
CCH85502.1
Homologs of previously reported genes of unknown function.
  
     0.553
CCH87217.1
Putative monooxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.530
CCH90235.1
Homologs of previously reported genes of unknown function.
  
     0.516
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
 0.489
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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