STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH88994.1Homologs of previously reported genes of unknown function. (325 aa)    
Predicted Functional Partners:
CCH88993.1
Conserved membrane protein of unknown function: putativeVon Willebrand factor type A domain (vwa); Homologs of previously reported genes of unknown function.
 
  
 0.989
CCH88995.1
Putative ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.973
CCH88877.1
ATPase associated with various cellular activities AAA_3; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.804
CCH88996.1
Protein of unknown function; No homology to any previously reported sequences.
       0.565
CCH90763.1
Putative AAA-type ATPase enzymatic complex assembly chaperone, MoxR type; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.544
CCH90783.1
Putative MoxR-like ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.507
nnrE
Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]
     
 0.504
CCH86646.1
Citrate lyase beta subunit; Function of strongly homologous gene; enzyme; Belongs to the HpcH/HpaI aldolase family.
      
 0.490
CCH89875.1
Homologs of previously reported genes of unknown function.
 
     0.462
CCH88879.1
Transglutaminase; Function of strongly homologous gene; enzyme.
 
  
 0.461
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.