STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88994.1Homologs of previously reported genes of unknown function. (325 aa)    
Predicted Functional Partners:
CCH88993.1
Conserved membrane protein of unknown function: putativeVon Willebrand factor type A domain (vwa); Homologs of previously reported genes of unknown function.
 
  
 0.991
CCH88995.1
Putative ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.977
CCH88877.1
ATPase associated with various cellular activities AAA_3; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.833
purD
Phosphoribosylamine--glycine ligase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the GARS family.
     
 0.709
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
      
 0.657
CCH86646.1
Citrate lyase beta subunit; Function of strongly homologous gene; enzyme; Belongs to the HpcH/HpaI aldolase family.
      
 0.647
CCH90763.1
Putative AAA-type ATPase enzymatic complex assembly chaperone, MoxR type; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.612
CCH90783.1
Putative MoxR-like ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.581
CCH88996.1
Protein of unknown function; No homology to any previously reported sequences.
       0.565
CCH86051.1
Oxyanion-translocating ATPase; Function of strongly homologous gene; transporter.
  
   
 0.552
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.