STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH88997.1Cell wall-associated hydrolase, invasion-associated protein (fragment); Function of strongly homologous gene; cell process. (444 aa)    
Predicted Functional Partners:
CCH88528.1
Putative peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.754
CCH89133.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
     0.752
ftsX
Cell division protein ftsX homolog; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.681
CCH88602.1
Homologs of previously reported genes of unknown function.
   
 
 0.602
CCH86500.1
Membrane metalloendopeptidase; Function of strongly homologous gene; enzyme.
 
   
 0.553
ftsE
Cell division ATP-binding protein FtsE transporter subunit; Part of the ABC transporter FtsEX involved in cellular division.
 
 
 0.501
CCH88998.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.476
amiC
N-acetylmuramoyl-L-alanine amidase; Function of strongly homologous gene; enzyme.
 
 
 0.428
CCH90622.1
Cell wall-associated hydrolase, invasion-associated protein; Function of strongly homologous gene; enzyme.
 
  
0.423
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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