STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89013.1Homologs of previously reported genes of unknown function. (716 aa)    
Predicted Functional Partners:
CCH87736.1
Membrane protein of unknown function, putative kinase domain; No homology to any previously reported sequences.
  
     0.741
CCH86537.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.739
CCH89894.1
Homologs of previously reported genes of unknown function.
  
   
 0.732
CCH90213.1
Homologs of previously reported genes of unknown function.
  
     0.680
CCH88850.1
CAAX amino terminal protease; Function of strongly homologous gene; enzyme.
  
     0.649
CCH90037.1
Homologs of previously reported genes of unknown function.
 
   
 0.630
CCH86232.1
Putative HAD hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.623
CCH90622.1
Cell wall-associated hydrolase, invasion-associated protein; Function of strongly homologous gene; enzyme.
  
  
 0.613
CCH89014.1
Homologs of previously reported genes of unknown function.
      
0.592
CCH87962.1
Anti-sigma regulatory factor, serine/threonine protein kinase; Function of strongly homologous gene; factor.
  
     0.583
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.