STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufUFeS cluster assembly, scaffold; Function of strongly homologous gene; cell process. (153 aa)    
Predicted Functional Partners:
iscS
Cysteine desulfurase; Function of strongly homologous gene; enzyme.
  
 0.998
sufC
ABC transporter associated with Fe-S cluster assembly, ATP binding protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  
 0.997
CCH89016.1
Metal-sulfur cluster biosynthetic enzyme; Function of strongly homologous gene; putative cell process.
 
    0.996
sufS
Cysteine desulfurase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.994
sufD
FeS assembly protein SufD; Function of strongly homologous gene; cell process.
 
  
 0.993
sufB
Transport protein associated with Fe-S cluster assembly, sufB; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  
 0.991
CCH87583.1
Selenocysteine lyase.
 
 
 0.973
csd
Cysteine desulfurase; Function of strongly homologous gene; enzyme.
 
 
 0.959
CCH90778.1
Cysteine desulfurase; Function of strongly homologous gene; enzyme.
 
 
 0.950
csdB
Selenocysteine lyase; Probably catalyzes the conversion of hercynylcysteine sulfoxide to ergothioneine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. EgtE subfamily.
 
 
 0.936
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.