STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89024.1Integral membrane protein of unknown function (modular protein); No homology to any previously reported sequences. (169 aa)    
Predicted Functional Partners:
CCH88244.1
Putative Integral membrane permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.767
CCH88219.1
Homologs of previously reported genes of unknown function.
 
     0.766
CCH86971.1
Homologs of previously reported genes of unknown function.
 
     0.716
CCH88228.1
Homologs of previously reported genes of unknown function.
 
     0.708
CCH87884.1
Putative multidrug resistance transporter, MFS family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.619
CCH88232.1
ATP-dependent transcriptional regulator, MalT-like, LuxR family.
 
     0.601
CCH88217.1
Putative voltage-gated potassium channel; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.588
CCH86975.1
Putative Transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
     0.584
CCH88211.1
Major facilitator permease; Function of strongly homologous gene; transporter.
  
     0.559
CCH88238.1
Diacylglycerol kinase; Function of strongly homologous gene; enzyme.
  
     0.542
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.