STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89045.1Putative universal stress family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process. (137 aa)    
Predicted Functional Partners:
CCH89047.1
Homologs of previously reported genes of unknown function.
 
     0.901
CCH89046.1
Homologs of previously reported genes of unknown function.
 
     0.875
CCH89048.1
Homologs of previously reported genes of unknown function.
 
     0.873
CCH89044.1
Lysophospholipase; Function of strongly homologous gene; enzyme.
       0.752
CCH89041.1
Conserved protein of unknown function; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
       0.552
CCH89042.1
Conserved protein of unknown function; Displays ATPase and GTPase activities.
       0.552
uvrC
Excinuclease, UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.552
uvrA-2
UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)(Excinuclease ATPase subunit); The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.503
CCH88981.1
Homologs of previously reported genes of unknown function.
  
    0.458
dksA
DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein; Function of strongly homologous gene; regulator.
 
  
 0.441
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.