STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89053.1Putative Zn-dependent hydrolase, glyoxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (127 aa)    
Predicted Functional Partners:
MODMU_3642
Fragment of Zn-dependent hydrolase, glyoxylase (part 1); Function of strongly homologous gene; enzyme.
  
    0.776
CCH88585.1
Homologs of previously reported genes of unknown function.
  
     0.688
CCH90360.1
Homologs of previously reported genes of unknown function.
  
    0.564
CCH89875.1
Homologs of previously reported genes of unknown function.
 
    0.555
CCH87208.1
Cytidine deaminase; Function of strongly homologous gene; enzyme.
 
     0.544
CCH90424.1
Conserved protein of unknown function, putative Carboxypeptidase domain; Homologs of previously reported genes of unknown function.
  
     0.446
CCH86869.1
Homologs of previously reported genes of unknown function.
  
     0.438
whiA
Sporulation transcription regulator whiA; Involved in cell division and chromosome segregation.
     
 0.410
CCH87631.1
Homologs of previously reported genes of unknown function.
  
     0.404
MODMU_3645
Fragment of Zn-dependent hydrolase, glyoxylase (part 2); Function of strongly homologous gene; enzyme.
       0.401
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.