Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
adh-3Alcohol dehydrogenase (Zinc-containing) (AdhT-like); Function of strongly homologous gene; enzyme. (345 aa)    
Predicted Functional Partners:
CCH90608.1
PTS system, fructose subfamily, IIC subunit; Function of strongly homologous gene; transporter.
    
  0.828
CCH87679.1
Homologs of previously reported genes of unknown function.
 
     0.783
CCH87680.1
Putative amidohydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.779
CCH88157.1
Phthalate 4,5-dioxygenase (modular protein); Function of strongly homologous gene; enzyme; Belongs to the cytochrome P450 family.
  
 0.701
CCH88349.1
Putative alcohol dehydrogenase adh (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  0.634
adhfe
Alcohol dehydrogenase, iron-type; Function of strongly homologous gene; enzyme.
  
 0.602
CCH87681.1
Sigma54 specific transcriptional regulator, Fis family; Function of strongly homologous gene; factor.
 
    0.551
CCH89107.1
Membrane protein of unknown function; No homology to any previously reported sequences.
       0.520
CCH89109.1
Putative NADH dehydrogenase (quinone); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.473
pobB
Phenoxybenzoate dioxygenase subunit beta; Function of strongly homologous gene; enzyme.
  
 
 0.452
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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