STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
CCH89112.1Putative dioxygenase with Rieske [2Fe-2S] iron-sulphur domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (404 aa)    
Predicted Functional Partners:
CCH88157.1
Phthalate 4,5-dioxygenase (modular protein); Function of strongly homologous gene; enzyme; Belongs to the cytochrome P450 family.
 
  
 0.693
CCH88314.1
Dimethylglycine oxidase; Function of strongly homologous gene; enzyme; Belongs to the GcvT family.
 
  
 0.659
CCH89110.1
Putative purine-cytosine permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the purine-cytosine permease (2.A.39) family.
 
     0.518
soxA
Sarcosine oxidase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.515
pobB
Phenoxybenzoate dioxygenase subunit beta; Function of strongly homologous gene; enzyme.
 
  
 0.502
pobB-2
Phthalate 4,5-dioxygenase; Function of strongly homologous gene; enzyme.
 
  
 0.495
CCH89108.1
Protein of unknown function; No homology to any previously reported sequences.
     
 0.478
CCH89109.1
Putative NADH dehydrogenase (quinone); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.456
CCH89111.1
Protein of unknown function; No homology to any previously reported sequences.
       0.456
CCH89113.1
Putative HTH-type transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
       0.439
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.