STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89132.1Homologs of previously reported genes of unknown function. (163 aa)    
Predicted Functional Partners:
CCH89134.1
Homologs of previously reported genes of unknown function.
  
  
 0.671
CCH89135.1
Homologs of previously reported genes of unknown function.
     
 0.661
CCH89136.1
Membrane protein of unknown function; No homology to any previously reported sequences.
     
 0.648
CCH89137.1
Homologs of previously reported genes of unknown function.
       0.640
CCH89133.1
Exported protein of unknown function; No homology to any previously reported sequences.
       0.635
CCH89138.1
Exported protein of unknown function; No homology to any previously reported sequences.
       0.632
CCH89139.1
Homologs of previously reported genes of unknown function.
       0.632
CCH89128.1
Homologs of previously reported genes of unknown function.
       0.502
CCH89130.1
Protein of unknown function; No homology to any previously reported sequences.
       0.488
CCH89129.1
Type IV secretory pathway VirD4-like; Function of strongly homologous gene; cell process.
       0.485
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.