Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCH89195.1 | fdh-6 | MODMU_3791 | MODMU_3789 | Homologs of previously reported genes of unknown function. | Formaldehyde dehydrogenase; Function of strongly homologous gene; enzyme. | 0.780 |
CCH89195.1 | fdh-7 | MODMU_3791 | MODMU_3792 | Homologs of previously reported genes of unknown function. | S-(hydroxymethyl)glutathione dehydrogenase; Function of strongly homologous gene; enzyme. | 0.786 |
CCH89195.1 | pfpI-2 | MODMU_3791 | MODMU_3790 | Homologs of previously reported genes of unknown function. | Intracellular protease, PfpI family; Function of strongly homologous gene; enzyme. | 0.785 |
fdh-6 | CCH89195.1 | MODMU_3789 | MODMU_3791 | Formaldehyde dehydrogenase; Function of strongly homologous gene; enzyme. | Homologs of previously reported genes of unknown function. | 0.780 |
fdh-6 | fdh-7 | MODMU_3789 | MODMU_3792 | Formaldehyde dehydrogenase; Function of strongly homologous gene; enzyme. | S-(hydroxymethyl)glutathione dehydrogenase; Function of strongly homologous gene; enzyme. | 0.823 |
fdh-6 | pfpI-2 | MODMU_3789 | MODMU_3790 | Formaldehyde dehydrogenase; Function of strongly homologous gene; enzyme. | Intracellular protease, PfpI family; Function of strongly homologous gene; enzyme. | 0.775 |
fdh-7 | CCH89195.1 | MODMU_3792 | MODMU_3791 | S-(hydroxymethyl)glutathione dehydrogenase; Function of strongly homologous gene; enzyme. | Homologs of previously reported genes of unknown function. | 0.786 |
fdh-7 | fdh-6 | MODMU_3792 | MODMU_3789 | S-(hydroxymethyl)glutathione dehydrogenase; Function of strongly homologous gene; enzyme. | Formaldehyde dehydrogenase; Function of strongly homologous gene; enzyme. | 0.823 |
fdh-7 | katA | MODMU_3792 | MODMU_0235 | S-(hydroxymethyl)glutathione dehydrogenase; Function of strongly homologous gene; enzyme. | Manganese-containing catalase; Function of strongly homologous gene; enzyme. | 0.423 |
fdh-7 | pfpI-2 | MODMU_3792 | MODMU_3790 | S-(hydroxymethyl)glutathione dehydrogenase; Function of strongly homologous gene; enzyme. | Intracellular protease, PfpI family; Function of strongly homologous gene; enzyme. | 0.782 |
katA | fdh-7 | MODMU_0235 | MODMU_3792 | Manganese-containing catalase; Function of strongly homologous gene; enzyme. | S-(hydroxymethyl)glutathione dehydrogenase; Function of strongly homologous gene; enzyme. | 0.423 |
pfpI-2 | CCH89195.1 | MODMU_3790 | MODMU_3791 | Intracellular protease, PfpI family; Function of strongly homologous gene; enzyme. | Homologs of previously reported genes of unknown function. | 0.785 |
pfpI-2 | fdh-6 | MODMU_3790 | MODMU_3789 | Intracellular protease, PfpI family; Function of strongly homologous gene; enzyme. | Formaldehyde dehydrogenase; Function of strongly homologous gene; enzyme. | 0.775 |
pfpI-2 | fdh-7 | MODMU_3790 | MODMU_3792 | Intracellular protease, PfpI family; Function of strongly homologous gene; enzyme. | S-(hydroxymethyl)glutathione dehydrogenase; Function of strongly homologous gene; enzyme. | 0.782 |