STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89211.1Anti-sigma regulatory factor (Ser/Thr protein kinase); Function of strongly homologous gene; regulator. (336 aa)    
Predicted Functional Partners:
CCH89212.1
Protein of unknown function; No homology to any previously reported sequences.
       0.773
CCH90800.1
Putative Anti-sigma-B factor antagonist; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Belongs to the anti-sigma-factor antagonist family.
 
   0.708
CCH87508.1
Homologs of previously reported genes of unknown function.
  
     0.676
CCH87688.1
Homologs of previously reported genes of unknown function.
  
     0.561
rsbS
RsbT antagonist protein rsbS; Function of strongly homologous gene; factor.
 
   0.553
CCH89213.1
Protein of unknown function; No homology to any previously reported sequences.
       0.551
CCH85488.1
Homologs of previously reported genes of unknown function.
 
 
 0.545
CCH86724.1
Homologs of previously reported genes of unknown function.
 
   0.544
rsbR
RsbT co-antagonist protein rsbRA; Function of strongly homologous gene; factor.
 
   0.529
CCH87558.1
Transcriptional regulator, XRE family; Function of strongly homologous gene; regulator.
  
     0.527
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.