STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89223.1Flp pilus assembly protein, ATPase CpaF; Function of strongly homologous gene; cell process. (481 aa)    
Predicted Functional Partners:
CCH89222.1
Flp pilus assembly protein TadB; Function of strongly homologous gene; cell process.
 
  
 0.901
CCH89221.1
Type II secretion system protein F; Function of strongly homologous gene; cell process.
 
  
 0.896
CCH86775.1
Flp pilus assembly protein TadC; Function of homologous gene experimentally demonstrated in an other organism; cell process.
 
  
 0.865
CCH89224.1
Homologs of previously reported genes of unknown function.
 
  
 0.858
CCH86776.1
Type II secretion system F domain protein; Function of strongly homologous gene; cell process.
 
  
 0.856
CCH89225.1
Homologs of previously reported genes of unknown function.
 
    0.824
CCH89226.1
Homologs of previously reported genes of unknown function.
 
     0.811
CCH86666.1
Type II secretion system F protein; Function of strongly homologous gene; cell process.
 
  
 0.794
CCH89220.1
Protein of unknown function; No homology to any previously reported sequences.
       0.693
CCH89218.1
TadE membrane protein; Function of strongly homologous gene; cell process.
 
    0.687
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.