Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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Experiments
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[Homology]
Score
CCH89225.1Homologs of previously reported genes of unknown function. (239 aa)    
Predicted Functional Partners:
CCH89224.1
Homologs of previously reported genes of unknown function.
 
  
 0.962
CCH89222.1
Flp pilus assembly protein TadB; Function of strongly homologous gene; cell process.
 
 
  0.956
CCH89221.1
Type II secretion system protein F; Function of strongly homologous gene; cell process.
 
 
  0.955
CCH89226.1
Homologs of previously reported genes of unknown function.
 
     0.945
CCH89218.1
TadE membrane protein; Function of strongly homologous gene; cell process.
 
    0.891
CCH89216.1
Putative LysM domain peptidoglycan-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
 
     0.881
fliP
Flagellar transport protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
  
 0.840
fliM
Flagellar motor switch protein; Function of strongly homologous gene; structure.
  
  
 0.839
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.839
flgC
Flagellar basal body rod protein; Function of strongly homologous gene; structure; Belongs to the flagella basal body rod proteins family.
  
  
 0.838
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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