STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89292.1Putative maleate cis-trans isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (244 aa)    
Predicted Functional Partners:
CCH89452.1
Isochorismatase hydrolase; Function of strongly homologous gene; enzyme.
  
 
 0.911
sdhA
Succinate dehydrogenase subunit A; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 
  0.903
CCH87853.1
Succinate dehydrogenase; Function of strongly homologous gene; enzyme.
   
 
  0.903
sdhB
Succinate dehydrogenase subunit B; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.900
sdhC
Succinate dehydrogenase/fumarate reductase cytochrome b subunit, b558 family; Function of strongly homologous gene; enzyme.
     
  0.900
CCH87852.1
Succinate dehydrogenase and fumarate reductase iron-sulfur protein; Function of strongly homologous gene; enzyme.
     
  0.900
nadB
L-aspartate oxidase (Quinolinate synthetase B); Catalyzes the oxidation of L-aspartate to iminoaspartate.
  
  
  0.823
CCH86316.1
Asparagine synthetase [glutamine-hydrolyzing]; Function of strongly homologous gene; enzyme.
     
  0.800
argG
Argininosuccinate synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
     
  0.800
pyrB
Aspartate carbamoyltransferase (catalytic subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
  0.800
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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