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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89325.1Homologs of previously reported genes of unknown function. (260 aa)    
Predicted Functional Partners:
CCH89328.1
Homologs of previously reported genes of unknown function.
 
     0.894
CCH89326.1
Nucleic acid binding OB-fold tRNA/helicase; Function of strongly homologous gene; enzyme.
       0.696
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.696
CCH88952.1
Homologs of previously reported genes of unknown function.
  
     0.692
CCH89331.1
Homologs of previously reported genes of unknown function.
 
     0.687
CCH90005.1
Homologs of previously reported genes of unknown function.
  
     0.611
CCH86937.1
ABC transporter, ATP-binding protein; Function of strongly homologous gene; transporter.
  
  
 0.599
CCH89559.1
ABC transporter (ATP binding protein)(tauB-like); Function of strongly homologous gene; transporter.
  
  
 0.599
CCH89327.1
Lipase/esterase; Function of strongly homologous gene; enzyme.
       0.587
CCH88858.1
YGGT family protein; Homologs of previously reported genes of unknown function.
  
     0.538
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.