STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89339.1Putative vancomycin resistance protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process. (721 aa)    
Predicted Functional Partners:
CCH89340.1
Ribonuclease; Function of strongly homologous gene; enzyme.
       0.563
CCH90405.1
Homologs of previously reported genes of unknown function.
  
     0.481
CCH89338.1
Homologs of previously reported genes of unknown function.
       0.478
CCH89825.1
Homologs of previously reported genes of unknown function.
  
     0.469
CCH90479.1
Homologs of previously reported genes of unknown function.
  
     0.461
CCH88794.1
Methyltransferase; Function of strongly homologous gene; enzyme.
 
     0.450
nagZ
Beta-N-acetylhexosaminidase (fragment); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.438
CCH89682.1
Homologs of previously reported genes of unknown function.
  
     0.426
dacD
Protein of unknown function; Gene remnant; Belongs to the peptidase S11 family.
 
   
 0.408
CCH85541.1
Competence/damage-inducible CinA-like protein; Function of strongly homologous gene; cell process; Belongs to the CinA family.
       0.404
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.