STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89350.1Homologs of previously reported genes of unknown function. (224 aa)    
Predicted Functional Partners:
CCH89351.1
Sulfate transporter; Function of strongly homologous gene; transporter.
 
     0.869
CCH89352.1
Homologs of previously reported genes of unknown function.
 
    0.778
CCH88219.1
Homologs of previously reported genes of unknown function.
 
     0.760
CCH88244.1
Putative Integral membrane permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.722
CCH86969.1
Sulfate transporter; Function of strongly homologous gene; structure.
 
     0.577
CCH89024.1
Integral membrane protein of unknown function (modular protein); No homology to any previously reported sequences.
 
     0.508
dtd
D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
       0.504
CCH89349.1
Adenylate/guanylate cyclase; Function of strongly homologous gene; enzyme.
       0.500
CCH88212.1
Homologs of previously reported genes of unknown function.
 
     0.499
CCH88227.1
Putative arylsulfatase, N-terminal; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.478
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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