STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89372.1Homologs of previously reported genes of unknown function. (206 aa)    
Predicted Functional Partners:
CCH89363.1
Putative methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.870
CCH89364.1
Homologs of previously reported genes of unknown function.
 
   
 0.811
CCH89362.1
Glycosyltransferase; Function of strongly homologous gene; enzyme.
 
  
 0.789
gcvP
Glycine cleavage system P-protein (glycine dehydrogenase); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
  0.746
CCH89371.1
Transcriptional regulator, winged helix family; Function of strongly homologous gene; regulator.
       0.705
CCH89373.1
Homologs of previously reported genes of unknown function.
       0.672
CCH89374.1
Aminoacylase; Function of strongly homologous gene; enzyme.
     
 0.524
CCH86298.1
Homologs of previously reported genes of unknown function.
  
     0.505
CCH89375.1
Amidohydrolase; Function of strongly homologous gene; enzyme.
  
    0.465
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.