STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89375.1Amidohydrolase; Function of strongly homologous gene; enzyme. (375 aa)    
Predicted Functional Partners:
glnA-4
Glutamine synthetase; Function of strongly homologous gene; enzyme; Belongs to the glutamine synthetase family.
     0.979
glnA
Glutamine synthetase 2; Function of strongly homologous gene; enzyme; Belongs to the glutamine synthetase family.
      0.905
CCH89374.1
Aminoacylase; Function of strongly homologous gene; enzyme.
       0.679
CCH89380.1
Amino acid permease-associated region; Function of strongly homologous gene; transporter.
 
     0.633
CCH89376.1
Short-chain dehydrogenase/reductase SDR; Function of strongly homologous gene; enzyme.
  
    0.565
CCH86872.1
Putative anti-sigma regulatory factor, serine/threonine protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.533
CCH89373.1
Homologs of previously reported genes of unknown function.
       0.511
CCH86724.1
Homologs of previously reported genes of unknown function.
  
     0.471
CCH89372.1
Homologs of previously reported genes of unknown function.
  
    0.465
CCH89110.1
Putative purine-cytosine permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the purine-cytosine permease (2.A.39) family.
  
     0.459
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.