STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
CCH89382.1Molecular chaperone (Small heat shock protein); Function of strongly homologous gene; structure; Belongs to the small heat shock protein (HSP20) family. (161 aa)    
Predicted Functional Partners:
CCH86202.1
ATP-dependent Clp protease ATP-binding subunit; Function of strongly homologous gene; enzyme; Belongs to the ClpA/ClpB family.
  
 
 0.701
CCH86262.1
Homologs of previously reported genes of unknown function.
  
 
 0.701
CCH86263.1
Protein of unknown function; No homology to any previously reported sequences.
  
 
 0.701
CCH86657.1
Putative ATP-dependent Clp protease ATP-binding subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.701
CCH87155.1
Clp domain protein; Function of strongly homologous gene; enzyme.
  
 
 0.701
clpC
Negative regulator of genetic competence ClpC/MecB; Function of strongly homologous gene; regulator; Belongs to the ClpA/ClpB family.
  
 
 0.701
clpB
Protein disaggregation chaperone; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.701
glnA-4
Glutamine synthetase; Function of strongly homologous gene; enzyme; Belongs to the glutamine synthetase family.
   
 
 0.695
MerR
Transcriptional regulator, MerR family; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
  
 0.659
grpE
Molecular chaperone GrpE (Heat shock protein); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. [...]
  
 
 0.655
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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