STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89384.1Membrane protein of unknown function; No homology to any previously reported sequences. (314 aa)    
Predicted Functional Partners:
blaI-2
Transcriptional regulator blaI; Function of strongly homologous gene; regulator.
 
 
  0.966
blaI
Transcriptional regulator blaI; Function of strongly homologous gene; regulator.
 
 
  0.869
CCH87377.1
Transcriptional regulator, CopY family; Function of strongly homologous gene; factor.
 
 
  0.868
cydD
Fused cysteine transporter subunits of ABC superfamily: membrane component; Function of strongly homologous gene; enzyme.
 
     0.766
cydA
Cytochrome bd ubiquinol oxidase subunit I; Function of strongly homologous gene; enzyme.
 
     0.595
ftsH
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
 
 0.555
cydB
Cytochrome d ubiquinol oxidase, subunit II; Function of strongly homologous gene; enzyme.
       0.518
CCH86062.1
Trypsin-like serine protease with C-terminal PDZ domain; Function of strongly homologous gene; enzyme.
 
  
 0.498
ftsH-2
Cell division protease ftsH homolog 4; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
 0.494
CCH88697.1
Homologs of previously reported genes of unknown function.
  
     0.492
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.