STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydDFused cysteine transporter subunits of ABC superfamily: membrane component; Function of strongly homologous gene; enzyme. (1137 aa)    
Predicted Functional Partners:
cydA
Cytochrome bd ubiquinol oxidase subunit I; Function of strongly homologous gene; enzyme.
 
  
 0.999
cydB
Cytochrome d ubiquinol oxidase, subunit II; Function of strongly homologous gene; enzyme.
 
  
 0.999
blaI-2
Transcriptional regulator blaI; Function of strongly homologous gene; regulator.
 
     0.800
CCH89384.1
Membrane protein of unknown function; No homology to any previously reported sequences.
 
     0.766
CCH85480.1
ABC transporter ATP-binding protein; Function of strongly homologous gene; transporter.
  
 
  0.670
CCH85606.1
ABC-type multidrug transport system, ATPase and permease component; Function of strongly homologous gene; enzyme.
  
 
  0.670
CCH85928.1
ABC transporter; Function of strongly homologous gene; transporter.
  
 
  0.670
CCH86313.1
ABC-type transport system, ATPase; Function of strongly homologous gene; enzyme.
  
 
  0.670
CCH86314.1
ABC transporter; Function of strongly homologous gene; transporter.
  
 
  0.670
CCH87300.1
ABC transporter; Function of strongly homologous gene; transporter.
  
 
  0.670
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.