STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89391.1Homologs of previously reported genes of unknown function. (209 aa)    
Predicted Functional Partners:
CCH89392.1
Homologs of previously reported genes of unknown function.
       0.676
CCH87508.1
Homologs of previously reported genes of unknown function.
  
     0.633
CCH87016.1
Regulatory protein (modular protein).
  
     0.518
CCH87770.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component; Function of strongly homologous gene; transporter.
  
     0.508
CCH87411.1
Transcriptional regulator, LuxR family; Function of strongly homologous gene; regulator.
 
   0.468
CCH87846.1
HTH-type transcriptional regulator; Function of strongly homologous gene; factor.
  
     0.439
CCH89393.1
NAD dependent epimerase/dehydratase (fragment); Function of strongly homologous gene; enzyme.
       0.434
CCH87344.1
Homologs of previously reported genes of unknown function.
  
     0.403
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.