STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89402.1Protein of unknown function; No homology to any previously reported sequences. (200 aa)    
Predicted Functional Partners:
CCH86567.1
Homologs of previously reported genes of unknown function.
 
     0.508
CCH86886.1
Homologs of previously reported genes of unknown function.
  
     0.500
CCH89854.1
Protein of unknown function; No homology to any previously reported sequences.
 
     0.497
CCH85813.1
Response regulator with antiterminator output domain; Function of strongly homologous gene; regulator.
  
     0.476
CCH89986.1
Conserved protein of unknown function, putative GAF domain; Homologs of previously reported genes of unknown function.
  
     0.451
CCH85812.1
Homologs of previously reported genes of unknown function.
  
     0.437
CCH89102.1
Two-component response regulator receiver and ANTAR, GAF and CheY domains; Function of strongly homologous gene; regulator.
  
     0.437
CCH88309.1
Homologs of previously reported genes of unknown function.
  
     0.432
CCH86107.1
Homologs of previously reported genes of unknown function.
 
     0.413
CCH86092.1
Homologs of previously reported genes of unknown function.
 
     0.409
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.