STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89412.1Protein of unknown function; No homology to any previously reported sequences. (210 aa)    
Predicted Functional Partners:
CCH90945.1
Major Facilitator Superfamily transporter; Function of strongly homologous gene; transporter.
     
 0.599
CCH90941.1
Transcriptional regulator, PadR family; Function of strongly homologous gene; regulator.
  
  
 0.503
phbA
acetyl-CoA acetyltransferase with thiolase domain (Acetoacetyl-CoA thiolase); Function of strongly homologous gene; enzyme; Belongs to the thiolase-like superfamily. Thiolase family.
  
    0.499
CCH89413.1
Short-chain dehydrogenase/reductase SDR; Function of strongly homologous gene; enzyme.
       0.496
CCH89414.1
Zn-dependent dipeptidase microsomal dipeptidase; Function of strongly homologous gene; enzyme.
       0.425
CCH89415.1
Putative peptidase M20; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.425
CCH89416.1
Methylaspartate ammonia-lyase; Function of strongly homologous gene; enzyme.
       0.425
CCH89417.1
Alcohol dehydrogenase GroES domain protein; Function of strongly homologous gene; enzyme.
       0.425
CCH89421.1
Short-chain dehydrogenase/reductase SDR; Function of strongly homologous gene; enzyme.
   
   0.405
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.