STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89432.1Putative peptidase, M38 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (405 aa)    
Predicted Functional Partners:
CCH89431.1
Putative succinylglutamate desuccinylase / aspartoacylase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.773
hutU
Urocanate hydratase (Urocanase) (Imidazolonepropionate hydrolase); Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.658
hutH
Histidine ammonia-lyase (Histidase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.657
CCH89430.1
Exported protein of unknown function; No homology to any previously reported sequences.
       0.558
CCH89433.1
Homologs of previously reported genes of unknown function.
       0.518
appA-2
ABC-type dipeptide transport system, extracellular component; Function of strongly homologous gene; transporter.
       0.427
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.