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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCH89434.1Thioredoxin reductase (NADPH); Function of strongly homologous gene; enzyme. (554 aa)    
Predicted Functional Partners:
CCH89435.1
Two-component sensor histidine kinase; Function of strongly homologous gene; enzyme.
 
 0.996
CCH87488.1
Two component signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
 
 0.990
CCH90658.1
Sensor protein with an histidine kinase signal transduction domain; Function of strongly homologous gene; regulator.
 
 0.964
trxA
Thioredoxin; Function of strongly homologous gene; carrier; Belongs to the thioredoxin family.
  
 0.907
CCH89901.1
Thioredoxin; Function of strongly homologous gene; carrier.
  
 0.907
trxA-2
Thioredoxin 1, redox factor; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the thioredoxin family.
  
 0.907
CCH90892.1
Chemotaxis protein histidine kinase; Function of strongly homologous gene; enzyme.
  
 0.896
CCH87733.1
Sensor kinase, two-component system; Function of strongly homologous gene; enzyme.
 
 0.893
trxB
Two component thioredoxin reductase carring response regulator; Function of strongly homologous gene; enzyme.
   
 0.887
CCH85754.1
Methyl-accepting chemotaxis transducer/sensory box protein; Function of strongly homologous gene; receptor.
  
 0.877
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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