STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH89444.1Putative DNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (1828 aa)    
Predicted Functional Partners:
CCH88956.1
Homologs of previously reported genes of unknown function.
  
    0.840
CCH86364.1
Homologs of previously reported genes of unknown function.
  
    0.835
CCH87736.1
Membrane protein of unknown function, putative kinase domain; No homology to any previously reported sequences.
 
     0.580
CCH89532.1
N-6 DNA methylase; Function of strongly homologous gene; enzyme.
 
  
 0.569
CCH89510.1
Putative exonuclease, RNase T and DNA polymerase III; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
      0.522
CCH89443.1
Homologs of previously reported genes of unknown function.
       0.498
CCH89530.1
Type III restriction enzyme, restriction (R) subunit; Function of strongly homologous gene; enzyme.
 
    0.477
CCH87746.1
Homologs of previously reported genes of unknown function.
  
     0.454
CCH86854.1
Homologs of previously reported genes of unknown function.
  
     0.444
CCH90130.1
Putative acyltransferase 3; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.436
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.