STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89484.1Homologs of previously reported genes of unknown function. (171 aa)    
Predicted Functional Partners:
otsA
Trehalose-phosphate synthase; Function of strongly homologous gene; enzyme.
  
  
 0.834
CCH87919.1
RNA polymerase, sigma 54 (sigma N) factor; Function of strongly homologous gene; factor.
   
    0.683
CCH87934.1
Conserved protein of unknown function, TPR repeats; Homologs of previously reported genes of unknown function.
   
    0.549
CCH89640.1
Homologs of previously reported genes of unknown function.
   
    0.549
CCH86706.1
Homologs of previously reported genes of unknown function.
  
 
 0.540
fruK
1-phosphofructokinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the carbohydrate kinase PfkB family.
  
    0.535
CCH89483.1
Homologs of previously reported genes of unknown function.
       0.512
CCH88979.1
Putative ATP/GTP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
    
 0.470
katE
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.468
katA-2
Catalase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the catalase family.
   
  
 0.468
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.