STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89494.1Putative Transglycosylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (252 aa)    
Predicted Functional Partners:
CCH87869.1
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family.
  
  
 
0.927
CCH88133.1
Penicillin-binding protein transpeptidase.
 
 
 
 0.781
CCH88857.1
Cell-division initiation protein; Function of strongly homologous gene; cell process.
   
 
 0.741
relA
GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
 
     0.719
mltG
Protein of unknown function; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
 
   
 0.705
ftsW
Cell division protein FtsW; Function of strongly homologous gene; cell process; Belongs to the SEDS family.
 
 
 
 0.693
CCH87372.1
Peptidase M23; Function of strongly homologous gene; enzyme.
  
     0.684
CCH86826.1
Peptidase; Function of strongly homologous gene; enzyme.
  
     0.682
CCH86737.1
Metalloendopeptidase; Function of strongly homologous gene; enzyme.
  
     0.678
ftsI
Cell division protein FtsI/penicillin-binding protein 2; Function of strongly homologous gene; enzyme.
 
 
 0.678
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.