STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89500.1Xanthine dehydrogenase, molybdenum binding subunit apoprotein. (781 aa)    
Predicted Functional Partners:
coxS
Carbon-monoxide dehydrogenase, Fe-S binding, small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.995
xdhC
Xanthine dehydrogenase, small subunit, 2Fe-2S ferredoxin, iron-sulphur binding; Function of strongly homologous gene; enzyme.
 
 0.987
CCH87823.1
Putative xanthine dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.987
coxS-2
Carbon-monoxide dehydrogenase, Fe-S binding, small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.987
coxS-3
Carbon-monoxide dehydrogenase Fe-S binding small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.987
xdhC-2
Xanthine dehydrogenase, small subunit, 2Fe-2S ferredoxin, iron-sulphur binding; Function of strongly homologous gene; enzyme.
 
 0.981
coxG
Carbon monoxide dehydrogenase subunit G; Function of strongly homologous gene; cell process.
  
 0.973
coxM
Carbon monoxide dehydrogenase, FAD-binding, medium subunit; Function of strongly homologous gene; enzyme.
 
 
 0.914
CCH89498.1
Protein of unknown function; No homology to any previously reported sequences.
 
 
 0.914
coxM-3
Carbon monoxide dehydrogenase, FAD binding, medium chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.875
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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