STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89521.1Putative ADP-ribosyl glycohydrolase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (464 aa)    
Predicted Functional Partners:
CCH89520.1
Homologs of previously reported genes of unknown function.
 
     0.813
glnK
Nitrogen regulatory protein P-II 1; Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the P(II) protein family.
   
 
 0.791
CCH90165.1
Putative Transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 0.759
CCH89519.1
NUDIX hydrolase (modular protein); Function of strongly homologous gene; enzyme.
 
     0.737
lepA
GTP-binding elongation factor; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
   
  0.621
CCH85641.1
Homologs of previously reported genes of unknown function.
   
 0.619
CCH87526.1
Homologs of previously reported genes of unknown function.
   
 0.619
CCH90925.1
Conserved protein of unknown function, putative Tetratricopeptide TPR_2 repeats; Homologs of previously reported genes of unknown function.
 
 
 0.587
CCH90608.1
PTS system, fructose subfamily, IIC subunit; Function of strongly homologous gene; transporter.
  
  
 0.554
CCH89172.1
Putative PAS/PAC sensor protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
   
 0.553
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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