STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89553.1Putative Purine catabolism PurC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (512 aa)    
Predicted Functional Partners:
cdd
Cytosine deaminase; Function of strongly homologous gene; enzyme.
 
     0.577
CCH86879.1
Transcriptional regulator, PucR family; Function of strongly homologous gene; regulator.
  
     0.566
CCH89548.1
ABC transporter, inner membrane subunit; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.533
CCH89549.1
ABC-type transport permease; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.533
CCH89550.1
ABC transporter (ATP-binding protein); Function of strongly homologous gene; enzyme.
       0.533
CCH89551.1
ABC transporter substrate-binding protein; Function of strongly homologous gene; transporter.
       0.533
CCH89601.1
Amino acid permease; Function of strongly homologous gene; transporter.
 
     0.481
CCH88704.1
Purine catabolism regulator-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
     0.456
CCH87846.1
HTH-type transcriptional regulator; Function of strongly homologous gene; factor.
  
    0.451
CCH87411.1
Transcriptional regulator, LuxR family; Function of strongly homologous gene; regulator.
  
     0.408
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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