STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89599.1Amidohydrolase; Function of strongly homologous gene; enzyme. (415 aa)    
Predicted Functional Partners:
CCH87608.1
Fumarylacetoacetate hydrolase family protein; Function of strongly homologous gene; enzyme.
      0.896
CCH89853.1
Fumarylacetoacetate hydrolase family protein; Function of strongly homologous gene; enzyme.
      0.879
CCH89598.1
Putative proline iminopeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.773
CCH89597.1
Putative Peptidase S9 prolyl oligopeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.728
hutU
Urocanate hydratase (Urocanase) (Imidazolonepropionate hydrolase); Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.658
hutH
Histidine ammonia-lyase (Histidase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.657
CCH89595.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.602
CCH89593.1
Extracellular peptide-binding protein; Function of strongly homologous gene; transporter.
 
     0.588
oppF-3
Oligopeptide transport protein (ABC superfamily, ATP-binding protein); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ABC transporter superfamily.
       0.582
CCH89594.1
Peptide transport permease; Function of strongly homologous gene; transporter.
       0.514
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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