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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89604.1Putative Alpha/beta hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (273 aa)    
Predicted Functional Partners:
CCH87906.1
Lipase/esterase; Function of strongly homologous gene; enzyme.
  
  
 
0.924
pcaD
3-oxoadipate enol-lactonase; Function of strongly homologous gene; enzyme.
  
  
 
0.923
catC
Muconolactone Delta-isomerase; Function of strongly homologous gene; enzyme.
   
 
 0.904
pcaC
4-carboxymuconolactone decarboxylase; Function of strongly homologous gene; enzyme.
  
 
 0.903
CCH89605.1
Homologs of previously reported genes of unknown function.
 
     0.820
CCH88253.1
Alpha/beta hydrolase fold protein.
  
     0.631
CCH89606.1
Putative oxidoreductase, NAD(P)-binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
   0.548
CCH89603.1
Primary amine oxidase; Function of strongly homologous gene; enzyme.
       0.539
CCH87482.1
Alpha/beta hydrolase; Function of strongly homologous gene; enzyme.
  
     0.524
CCH89607.1
Glycosyl hydrolase, glucoamylase; Function of strongly homologous gene; enzyme.
       0.512
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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