STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89608.1Subtilisin-like peptidase; Function of strongly homologous gene; enzyme. (917 aa)    
Predicted Functional Partners:
CCH89609.1
Putative fatty-acid--CoA ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
  0.561
CCH87949.1
Peptidase S8 and S53, subtilisin, kexin, sedolisin (modular protein); Function of strongly homologous gene; enzyme.
  
     0.455
CCH88145.1
Cation-transporting ATPase E; Function of strongly homologous gene; enzyme.
  
 0.440
ctpI
Cation-transporting ATPase I; Function of strongly homologous gene; enzyme.
  
 0.437
CCH87937.1
Peptidase M28; Function of strongly homologous gene; enzyme.
  
   
 0.424
CCH85577.1
Homologs of previously reported genes of unknown function.
 
 
 0.411
CCH88960.1
Homologs of previously reported genes of unknown function.
  
 0.406
CCH90052.1
Putative cell division-related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
  
 
 0.402
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.