STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89637.1Putative PAS/PAC sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (756 aa)    
Predicted Functional Partners:
CCH90658.1
Sensor protein with an histidine kinase signal transduction domain; Function of strongly homologous gene; regulator.
 
 0.934
rsbQ-2
Regulator of RsbP phosphatase; Function of homologous gene experimentally demonstrated in an other organism; regulator.
    0.870
CCH87506.1
Anti-anti-sigma factor; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the anti-sigma-factor antagonist family.
 
   0.635
CCH87962.1
Anti-sigma regulatory factor, serine/threonine protein kinase; Function of strongly homologous gene; factor.
 
   0.602
CCH86854.1
Homologs of previously reported genes of unknown function.
  
     0.588
rsbR
RsbT co-antagonist protein rsbRA; Function of strongly homologous gene; factor.
 
   0.585
rsbS
RsbT antagonist protein rsbS; Function of strongly homologous gene; factor.
 
   0.575
CCH89648.1
Anti-sigma factor antagonist; Function of strongly homologous gene; factor; Belongs to the anti-sigma-factor antagonist family.
 
   0.526
cypC
Cytochrome P450; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.512
CCH87504.1
Putative anti-sigma regulatory factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
   0.504
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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