STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cypCCytochrome P450; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (416 aa)    
Predicted Functional Partners:
CCH85874.1
Acetoacetyl-CoA synthase; Function of strongly homologous gene; enzyme.
  
 0.714
CCH89641.1
Protein of unknown function; No homology to any previously reported sequences.
  
  0.700
CCH89640.1
Homologs of previously reported genes of unknown function.
       0.655
pobB
Phenoxybenzoate dioxygenase subunit beta; Function of strongly homologous gene; enzyme.
  
 0.545
paaE
Phenylacetic acid degradation NADH oxidoreductase; Function of strongly homologous gene; enzyme.
  
 0.545
pobB-2
Phthalate 4,5-dioxygenase; Function of strongly homologous gene; enzyme.
  
 0.545
CCH88157.1
Phthalate 4,5-dioxygenase (modular protein); Function of strongly homologous gene; enzyme; Belongs to the cytochrome P450 family.
  
 0.545
CCH88606.1
Flavodoxin reductase; Function of strongly homologous gene; enzyme.
  
 0.545
rsbQ-2
Regulator of RsbP phosphatase; Function of homologous gene experimentally demonstrated in an other organism; regulator.
   
   0.539
CCH87930.1
Protein of unknown function; No homology to any previously reported sequences.
  
 
 0.527
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.