STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89653.1Homologs of previously reported genes of unknown function. (1135 aa)    
Predicted Functional Partners:
faeB
Feruloyl esterase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.727
CCH89654.1
Putative PAS/PAC sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.671
CCH86618.1
Putative ABC transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.634
CCH88615.1
Conserved protein of unknown function, putative Tetratricopeptide repeats; Homologs of previously reported genes of unknown function.
  
     0.551
CCH87504.1
Putative anti-sigma regulatory factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
     0.528
CCH87558.1
Transcriptional regulator, XRE family; Function of strongly homologous gene; regulator.
  
     0.527
CCH86001.1
Homologs of previously reported genes of unknown function.
  
     0.517
CCH89905.1
Homologs of previously reported genes of unknown function.
  
     0.516
CCH87582.1
NADPH-dependent fmn reductase.
  
     0.514
CCH86288.1
Homologs of previously reported genes of unknown function.
      0.509
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.