STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89662.1Aldehyde dehydrogenase [NAD+]; Function of strongly homologous gene; enzyme; Belongs to the aldehyde dehydrogenase family. (486 aa)    
Predicted Functional Partners:
aldH
NAD-dependent aldehyde dehydrogenase; Function of strongly homologous gene; enzyme.
 
     0.956
CCH87817.1
Aryl-alcohol dehydrogenase; Function of strongly homologous gene; enzyme.
 
 0.913
xylB
Aryl-alcohol dehydrogenase; Function of strongly homologous gene; enzyme.
 
 0.913
CCH86880.1
Proline dehydrogenase; Function of strongly homologous gene; enzyme.
 
 
 0.908
CCH89820.1
Acylphosphatase; Function of strongly homologous gene; enzyme.
    
 0.905
amdA
Amidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the amidase family.
   
  0.904
zhuL
Enantiomer selective amidase.
   
  0.904
amdA-2
Amidase; Function of strongly homologous gene; enzyme.
   
  0.904
amiB
Amidase amiB2; Function of strongly homologous gene; enzyme; Belongs to the amidase family.
   
  0.904
CCH87564.1
Putative secreted amidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
   
  0.904
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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