STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH89670.1Homologs of previously reported genes of unknown function. (129 aa)    
Predicted Functional Partners:
CCH89854.1
Protein of unknown function; No homology to any previously reported sequences.
  
  
  0.694
icmF
Methylmalonyl-CoA mutase, large subunit; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
    
 0.641
mutB
Methylmalonyl-CoA mutase large subunit (MCM-alpha); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.633
CCH86107.1
Homologs of previously reported genes of unknown function.
  
  
  0.598
CCH86236.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Function of strongly homologous gene; enzyme.
  
  
  0.572
CCH89669.1
Protein of unknown function; No homology to any previously reported sequences.
       0.553
CCH86567.1
Homologs of previously reported genes of unknown function.
  
  
  0.546
CCH85771.1
Homologs of previously reported genes of unknown function.
  
   
 0.471
CCH88179.1
Flavin reductase domain protein FMN-binding; Function of strongly homologous gene; enzyme.
  
 
  0.453
CCH86092.1
Homologs of previously reported genes of unknown function.
  
  
  0.447
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.