STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89675.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (251 aa)    
Predicted Functional Partners:
argS
Arginyl-tRNA synthetase; Function of strongly homologous gene; enzyme.
    
 0.867
CCH87341.1
FMN-binding negative transcriptional regulator; Function of strongly homologous gene; factor.
  
  
 0.781
lysS
Lysyl-tRNA synthetase; Function of strongly homologous gene; enzyme; Belongs to the class-II aminoacyl-tRNA synthetase family.
 
      0.637
CCH89676.1
Putative rifampin ADP-ribosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.588
CCH90041.1
Lysine efflux permease; Function of strongly homologous gene; transporter.
  
    0.556
arcA
Arginine deiminase; Function of strongly homologous gene; enzyme.
 
     0.464
CCH89677.1
Homologs of previously reported genes of unknown function.
 
     0.437
CCH86661.1
Short-chain dehydrogenase/reductase SDR; Function of strongly homologous gene; enzyme.
 
      0.417
nnrE
Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]
       0.408
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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