STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89677.1Homologs of previously reported genes of unknown function. (110 aa)    
Predicted Functional Partners:
CCH85524.1
Homologs of previously reported genes of unknown function.
  
     0.642
CCH89640.1
Homologs of previously reported genes of unknown function.
  
     0.612
CCH87769.1
Homologs of previously reported genes of unknown function.
  
     0.594
CCH90928.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.561
CCH87830.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
     0.530
CCH87930.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.459
CCH89676.1
Putative rifampin ADP-ribosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.452
CCH85625.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
     0.449
CCH86817.1
4Fe-4S ferredoxin, iron-sulfur binding; Function of strongly homologous gene; carrier.
  
     0.439
CCH89675.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.437
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.