STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89694.1Polar amino acid transport protein, ATP-binding protein; Function of strongly homologous gene; transporter. (251 aa)    
Predicted Functional Partners:
CCH89696.1
Polar amino acid ABC transporter, inner membrane subunit; Function of strongly homologous gene; transporter.
 0.997
gluD
Glutamate transport system permease protein gluD; Function of strongly homologous gene; transporter.
 0.997
CCH89695.1
Extracellular amino acid ABC transporter substrate-binding protein, PAAT family; Function of strongly homologous gene; transporter; Belongs to the bacterial solute-binding protein 3 family.
 0.994
CCH87418.1
Transporter subunit: permease component of ABC superfamily transporter; Function of strongly homologous gene; transporter.
 
 0.991
CCH87592.1
Amino acid ABC transporter membrane protein (fragment).
 
 0.991
modB
Molybdenum transport system permease protein modB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
     0.901
CCH87417.1
L-cystine-binding protein; Function of strongly homologous gene; transporter; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.864
CCH88265.1
ABC-type branched-chain amino acid transport system, permease component; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.756
CCH87801.1
Putative ABC transport system ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
    
0.744
CCH85993.1
ABC-type branched-chain amino acid transport system, permease component; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.731
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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