STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89721.1Homologs of previously reported genes of unknown function. (436 aa)    
Predicted Functional Partners:
gcp
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 0.976
CCH89719.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family; Function of strongly homologous gene; transporter.
       0.554
CCH89722.1
Transcriptional regulator, TetR family (fragment); Function of strongly homologous gene; regulator.
       0.535
CCH89723.1
Protein of unknown function; No homology to any previously reported sequences.
       0.535
ugpC-2
Sugar-binding transport ATP-binding protein; Function of strongly homologous gene; enzyme; Belongs to the ABC transporter superfamily.
  
    0.488
CCH89720.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; Function of strongly homologous gene; transporter.
       0.480
CCH89718.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Function of strongly homologous gene; transporter.
       0.477
CCH85654.1
Alkylated DNA repair protein, DNA-N1-methyladenine dioxygenase; Function of strongly homologous gene; enzyme.
 
    0.448
CCH89725.1
Competence/damage-inducible protein cinA; Function of strongly homologous gene; cell process; Belongs to the CinA family.
       0.440
pgsA-2
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Function of strongly homologous gene; enzyme; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.440
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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