STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89723.1Protein of unknown function; No homology to any previously reported sequences. (451 aa)    
Predicted Functional Partners:
CCH89722.1
Transcriptional regulator, TetR family (fragment); Function of strongly homologous gene; regulator.
      0.780
CCH86764.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
     0.770
CCH89725.1
Competence/damage-inducible protein cinA; Function of strongly homologous gene; cell process; Belongs to the CinA family.
       0.623
pgsA-2
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Function of strongly homologous gene; enzyme; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.623
CCH85542.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
     0.584
CCH89721.1
Homologs of previously reported genes of unknown function.
       0.535
rimO
Ribosomal protein S12 methylthiotransferase rimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
       0.525
CCH90380.1
Putative Predicted protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.467
CCH89955.1
Peptidase S26A, superoxide dismutase maturation protease, nickel-type; Function of strongly homologous gene; enzyme.
  
     0.422
ftsK
DNA translocase ftsK; Function of strongly homologous gene; cell process.
       0.417
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.