STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89751.1Putative epoxide hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (331 aa)    
Predicted Functional Partners:
CCH88253.1
Alpha/beta hydrolase fold protein.
  
     0.699
ilvE
Branched-chain amino acid aminotransferase protein (BCAT); Function of strongly homologous gene; enzyme.
 
 
   0.614
CCH90032.1
Alpha/beta hydrolase; Function of strongly homologous gene; enzyme.
  
     0.592
CCH89349.1
Adenylate/guanylate cyclase; Function of strongly homologous gene; enzyme.
  
   
 0.534
CCH87954.1
Putative alpha/beta-Hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.524
ribF
Riboflavin biosynthesis protein ribF [Includes: Riboflavin kinase; Function of strongly homologous gene; enzyme; Belongs to the ribF family.
       0.455
CCH86870.1
Putative hydrolase or acyltransferase of alpha/beta superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.430
CCH86944.1
Putative phytoene dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.426
CCH89604.1
Putative Alpha/beta hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.411
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.