STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89772.1Homologs of previously reported genes of unknown function. (106 aa)    
Predicted Functional Partners:
qcrA
Menaquinol-cytochrome c reductase iron-sulfur subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
   0.946
ctaF
Cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
 
   0.946
qcrC
Ubiquinol-cytochrome c reductase cytochrome c subunit; Function of strongly homologous gene; enzyme.
  
 
   0.938
CCH86282.1
Homologs of previously reported genes of unknown function.
    
   0.927
qcrB
Menaquinol-cytochrome c reductase cytochrome b subunit; Function of strongly homologous gene; enzyme.
    
   0.927
ctaC
Cytochrome c oxidase subunit 2; Function of strongly homologous gene; enzyme.
    
   0.927
ctaE
Cytochrome c oxidase subunit 3; Function of strongly homologous gene; enzyme.
    
   0.917
CCH86208.1
Homologs of previously reported genes of unknown function.
  
 
   0.850
CCH86997.1
Homologs of previously reported genes of unknown function.
  
 
   0.847
CCH86996.1
Homologs of previously reported genes of unknown function.
    
   0.846
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.