STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89772.1Homologs of previously reported genes of unknown function. (106 aa)    
Predicted Functional Partners:
ctaF
Cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
 
   0.969
qcrA
Menaquinol-cytochrome c reductase iron-sulfur subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
   0.965
qcrC
Ubiquinol-cytochrome c reductase cytochrome c subunit; Function of strongly homologous gene; enzyme.
  
 
   0.960
ctaE
Cytochrome c oxidase subunit 3; Function of strongly homologous gene; enzyme.
    
   0.953
qcrB
Menaquinol-cytochrome c reductase cytochrome b subunit; Function of strongly homologous gene; enzyme.
    
   0.953
ctaC
Cytochrome c oxidase subunit 2; Function of strongly homologous gene; enzyme.
    
   0.953
ctaD
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
    
   0.937
ctaD-2
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
    
   0.937
CCH86282.1
Homologs of previously reported genes of unknown function.
    
   0.924
CCH86997.1
Homologs of previously reported genes of unknown function.
  
 
   0.896
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.